BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018F04LP1|AL427347
(1023 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1664 1287 0.0
>3x_Contig1664
Length = 15696
Score = 1287 bits (642), Expect = 0.0
Identities = 901/996 (90%), Gaps = 2/996 (0%)
Strand = Plus / Plus
Query: 2 tctgacatcttaactgacgaagaaattgtcactttcaaagccaccatcaagaaacaacta 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7666 tctgacatcttaactgacgaagaaattgtcactttcaaagccaccatcaagaaacaacta 7725
Query: 62 gaacaagccaacgtgcagttgtttgawccacctcaatattctatgctgggagatgaaact 121
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 7726 gaacaagccaacgtgcagttgtttgaaccacctcaatattctatgctgggagatgaaact 7785
Query: 122 tcaactgataacatctttgataagwttccttttgccattgtcggttccactgaacaagtc 181
|||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 7786 tcaactgaaaacatctttgaaaagattccttttgccattgtcggttccactgaacaagtc 7845
Query: 182 actacagaagacggtagattagttagaggtagggcttacccatggggtgtyatcgaagtt 241
|||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||
Sbjct: 7846 actacagaagacggtagaaaagttagaggtagggcttacccatggggtgtcatcgaagtt 7905
Query: 242 gacaacacaaaacattctgattttgtttatttttgagatctattatttagacaatacttg 301
|||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||
Sbjct: 7906 gacaacacaaaacattctgattttgtatatttaagagatctattaattagacaatacttg 7965
Query: 302 gtagatttacgcgataggwctaacawagtattattcgatttttttagttctgatatgcta 361
| ||| |||||||| ||| |||||| |||||||| ||| | ||| ||||| | ||||
Sbjct: 7966 gaagaattacgcgaaaggactaacaaagtattatacgaaaaatatagatctgaaaagcta 8025
Query: 362 ttwggattgggtatcwtacwagacaacagtgtcttctagattttcgttccagatactagn 421
|| |||||||||||| || |||||||||||||||| ||| ||||| |||||| |||||
Sbjct: 8026 ttaggattgggtatcaaacaagacaacagtgtcttcaagaatttcgatccagaaactaga 8085
Query: 422 cnatwggtggaatttctactacacgatgtctaactwgctattttggtagctgatatgttg 481
| | || |||| | ||||||||| ||| |||| |||| |||| |||||| ||| |
Sbjct: 8086 caaaaggaggaaaaacaactacacgaagtcaaactagctaaattggaagctgaaatgaag 8145
Query: 482 gctgtwttccwacagatagttgaagattaggtaaagttgtttcagatatctgatgctgaa 541
|| || |||| ||||| ||||||||| ||| |||| ||| |||| |||||| ||||||
Sbjct: 8146 gcagtattccaacagaaagttgaagaaaaggaaaagaagttacagaaatctgaagctgaa 8205
Query: 542 ttgttcgctagacacatggtattgttggataagcttactagccaacttatagcgttagat 601
|||||||||||||||| || |||| |||||||||||| |||||||| | |||||||||
Sbjct: 8206 ttgttcgctagacacaaggaattgaaggataagcttacaagccaactaaaagcgttagaa 8265
Query: 602 gattagttgcgtcatcttgttctttcccttgctaaccatcctacttgctctcctattcct 661
|| || |||||| |||| ||||||||||||||||| || || ||||||| ||||||
Sbjct: 8266 gaaaagaagcgtcaacttgaactttcccttgctaaccaaccaacaagctctccaattcct 8325
Query: 662 gctaagttgattggcttcttacgttaagaaatgagtaagatgataaatatagtatagtct 721
|||||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8326 gctaagaagaaaggcttcttacgttaagaaatgagtaagatgataaatatagtatagtct 8385
Query: 722 tcgtgaacttcatctgtatttcacaagatctccagacatgtctttattttctttacatcc 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8386 tcgtgaacttcatctgtatttcacaagatctccagacatgtctttattttctttacatcc 8445
Query: 782 gtctatcttttatctaavtgtataactacgaatctcaataactaagccagctgaagctaa 841
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8446 gtctatcttttatctaaatgtataactacgaatctcaataactaagccagctgaagctaa 8505
Query: 842 ctaatcaacacaatgtcaacgagtgtaatgcatcaccatacagtacatgtaacaaarcaa 901
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 8506 ctaatcaacacaatgtcaacgagtgtaatgcatcaccatacagtacatgtaacaaagcaa 8565
Query: 902 aacggwtaagtgcccagctagctgcgacacaactmacgtaaattttgtgggtctgttaat 961
||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 8566 aacggttaagtgcccagctagctgcgacacaactaacgtaaattttgtgggtctgttaat 8625
Query: 962 gcggtt-aatccaggtaattcgc-ccgtttagtagg 995
|||||| |||| ||||||||||| | ||||||||||
Sbjct: 8626 gcggttaaatcaaggtaattcgcacagtttagtagg 8661
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6204
Number of Sequences: 1807
Number of extensions: 6204
Number of successful extensions: 35
Number of sequences better than 1.0e-20: 1
length of query: 1023
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1007
effective length of database: 10,329,639
effective search space: 10401946473
effective search space used: 10401946473
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.5 bits)
S2: 50 (100.7 bits)